STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE01_09293Uncharacterized protein. (365 aa)    
Predicted Functional Partners:
VE01_07701
Uncharacterized protein.
    
 0.835
VE01_06008
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.770
VE01_05752
Uncharacterized protein.
    
  0.770
VE01_05016
Uncharacterized protein.
  
 
  0.629
VE01_00025
Uncharacterized protein.
    
  0.579
MRP4
37S ribosomal protein, mitochondrial; Belongs to the universal ribosomal protein uS2 family.
   
  0.577
VE01_07360
Uncharacterized protein.
   
  0.577
MRPS9
Mitochondrial ribosomal protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.577
VE01_03255
Uncharacterized protein.
    
  0.577
VE01_06283
L51_S25_CI-B8 domain-containing protein.
    
  0.576
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
Server load: low (18%) [HD]