STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE01_09707Amino_oxidase domain-containing protein. (585 aa)    
Predicted Functional Partners:
RO1
Dynein heavy chain, cytoplasmic.
    
 0.954
VE01_10087
Uncharacterized protein.
    
 0.844
NDE1_2
NADH:ubiquinone oxidoreductase.
    
 
 0.834
VE01_05560
CAP-Gly domain-containing protein.
    
 0.829
VE01_06880
Uncharacterized protein.
    
 0.825
VE01_03484
CS domain-containing protein.
    
 0.823
VE01_03784
WD_REPEATS_REGION domain-containing protein.
    
 0.818
VE01_05100
Tyrosinase_Cu-bd domain-containing protein.
    
  0.811
ASN1
Asparagine synthetase.
    
  0.810
VE01_08918
Uncharacterized protein.
     
 0.775
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.