STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE01_08236Uncharacterized protein. (753 aa)    
Predicted Functional Partners:
VE01_06104
UBA domain-containing protein.
    
 0.911
MGE1
Mitochondrial matrix cochaperone; Belongs to the GrpE family.
  
 0.890
VE01_03937
ANK_REP_REGION domain-containing protein.
  
 0.889
VE01_05947
Uncharacterized protein.
   
 0.886
VE01_02032
Flavin_Reduct domain-containing protein.
   
 0.886
HSP90
Heat shock protein 90.
   
 0.886
VE01_07387
J domain-containing protein.
  
 0.866
SSE1
Adenyl-nucleotide exchange factor sse1.
   
 0.864
KAR2
ATPase with role in protein import into the ER; Belongs to the heat shock protein 70 family.
   
 0.838
SKN7
Kinase-regulated stress-responsive transcription factor skn7.
    
 0.831
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
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