STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE01_07628Peptidase_S24 domain-containing protein. (191 aa)    
Predicted Functional Partners:
VE01_02306
Uncharacterized protein.
   
 0.879
VE01_05393
Signal peptidase subunit 3.
    
 0.875
VE01_07806
Uncharacterized protein.
   
 0.849
cyn1
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.849
IML1
Vacuolar membrane-associated protein iml1.
    
 0.816
RTC1
SEA (Seh1-associated) complex subunit.
    
 0.801
VE01_04498
WD_REPEATS_REGION domain-containing protein.
    
 0.800
NPR2
Nitrogen permease regulating protein.
    
 0.783
VE01_07701
Uncharacterized protein.
     
 0.639
VMA4
V-ATPase V1 sector subunit E.
     
 0.618
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.