STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE01_06422Uncharacterized protein. (960 aa)    
Predicted Functional Partners:
VE01_07701
Uncharacterized protein.
   
 0.861
VE01_01631
ANK_REP_REGION domain-containing protein.
   
  0.580
VE01_03937
ANK_REP_REGION domain-containing protein.
   
  0.556
VE01_01959
Uncharacterized protein.
  
 
  0.524
VE01_04701
Calponin-homology (CH) domain-containing protein.
  
  0.503
VE01_08754
Uncharacterized protein.
  
 
   0.493
VE01_10117
Uncharacterized protein.
  
  0.492
VE01_00177
Uncharacterized protein.
  
 
   0.472
EAF3
Esa1p-associated factor.
    
  0.466
VE01_02166
Uncharacterized protein.
  
 
  0.465
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.