STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE01_05648Uncharacterized protein. (487 aa)    
Predicted Functional Partners:
SWC4
Swr complex subunit.
    
 0.968
VE01_09031
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.966
EPL1
Enhancer of polycomb-like protein.
    
 0.965
VE01_06539
Uncharacterized protein.
    
 0.962
EAF3
Esa1p-associated factor.
   
 0.960
ARP4
NuA4 histone acetyltransferase subunit; Belongs to the actin family.
    
 0.900
RVB1
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.876
RVB2
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.856
HTZ1
Histone H2A; Belongs to the histone H2A family.
    
 
 0.813
YAF9
NuA4 histone H4 acetyltransferase complex and the SWR1 complex subunit.
    
 0.779
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.