Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDC8 | DFR1 | A0A1B8GL17 | A0A1B8GUK0 | Thymidylate kinase. | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | 0.871 |
CDC8 | HEM12 | A0A1B8GL17 | A0A1B8G8H3 | Thymidylate kinase. | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | 0.426 |
CDC8 | HEM3_2 | A0A1B8GL17 | A0A1B8GKV7 | Thymidylate kinase. | Porphobilinogen deaminase. | 0.566 |
DFR1 | CDC8 | A0A1B8GUK0 | A0A1B8GL17 | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | Thymidylate kinase. | 0.871 |
DFR1 | HEM3_2 | A0A1B8GUK0 | A0A1B8GKV7 | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | Porphobilinogen deaminase. | 0.752 |
DFR1 | VE01_09013 | A0A1B8GUK0 | A0A1B8GB75 | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | Uncharacterized protein. | 0.871 |
HEM12 | CDC8 | A0A1B8G8H3 | A0A1B8GL17 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | Thymidylate kinase. | 0.426 |
HEM12 | HEM13 | A0A1B8G8H3 | A0A2P2SXE2 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | Coproporphyrinogen-III oxidase. | 0.919 |
HEM12 | HEM15 | A0A1B8G8H3 | A0A1B8GHA8 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | 0.963 |
HEM12 | HEM2 | A0A1B8G8H3 | A0A1B8GM61 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.785 |
HEM12 | HEM3_2 | A0A1B8G8H3 | A0A1B8GKV7 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | Porphobilinogen deaminase. | 0.980 |
HEM12 | MET8 | A0A1B8G8H3 | A0A1B8GWW9 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | Bifunctional dehydrogenase and ferrochelatase. | 0.890 |
HEM12 | VE01_02682 | A0A1B8G8H3 | A0A1B8GTP3 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | TP_methylase domain-containing protein. | 0.894 |
HEM12 | VE01_09013 | A0A1B8G8H3 | A0A1B8GB75 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | Uncharacterized protein. | 0.426 |
HEM12 | VE01_09413 | A0A1B8G8H3 | A0A1B8G912 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | HEM4 domain-containing protein. | 0.901 |
HEM13 | HEM12 | A0A2P2SXE2 | A0A1B8G8H3 | Coproporphyrinogen-III oxidase. | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | 0.919 |
HEM13 | HEM15 | A0A2P2SXE2 | A0A1B8GHA8 | Coproporphyrinogen-III oxidase. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | 0.545 |
HEM13 | HEM2 | A0A2P2SXE2 | A0A1B8GM61 | Coproporphyrinogen-III oxidase. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.577 |
HEM13 | HEM3_2 | A0A2P2SXE2 | A0A1B8GKV7 | Coproporphyrinogen-III oxidase. | Porphobilinogen deaminase. | 0.558 |
HEM13 | VE01_02682 | A0A2P2SXE2 | A0A1B8GTP3 | Coproporphyrinogen-III oxidase. | TP_methylase domain-containing protein. | 0.490 |
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