STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE01_05488Uncharacterized protein. (162 aa)    
Predicted Functional Partners:
VE01_07952
Uncharacterized protein.
   
 0.999
VE01_08038
AAA domain-containing protein.
   
 0.995
VE01_03074
AAA domain-containing protein.
   
 0.950
VE01_08130
Rep_fac_C domain-containing protein.
   
 0.947
POL2
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.941
RFC5
Replication factor C (RF-C) subunit.
   
 0.901
RFC4
Replication factor C subunit 4.
   
 0.895
RAD17
Cell cycle checkpoint protein rad17.
   
 0.858
POL1
DNA polymerase.
   
 0.803
VE01_00834
Uncharacterized protein.
   
 0.803
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.