STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL39Ribosomal 60S subunit protein L39. (89 aa)    
Predicted Functional Partners:
RPL31
60S ribosomal protein L31.
   
 0.999
RPL32
Ribosomal 60S subunit protein L32.
   
 0.999
RPP0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.999
RPL36
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.999
RPL11
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 0.999
VE01_08183
Ribosomal_L14e domain-containing protein.
   
 0.999
RPL26A
Ribosomal 60S subunit protein L26A.
   
 0.999
RPL28
Ribosomal 60S subunit protein L28; Belongs to the universal ribosomal protein uL15 family.
   
 0.999
RPL15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.999
RPL35
60S ribosomal protein L35.
   
 0.999
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.