STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE01_04284Uncharacterized protein. (193 aa)    
Predicted Functional Partners:
ATG1
Serine/threonine-protein kinase.
    
 0.998
ATG13
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
    
 0.987
VPS34
Phosphatidylinositol 3-kinase VPS34.
    
 0.895
VPS15
Serine/threonine-protein kinase.
     
 0.877
ATG11
Oligomeric, coiled-coil, peripheral membrane protein.
    
 0.874
VE01_02650
WD_REPEATS_REGION domain-containing protein.
     
 0.870
TOR1
Phosphatidylinositol kinase-protein kinase tor1; Belongs to the PI3/PI4-kinase family.
     
 0.848
ATG6_2
Autophagy protein.
    
 0.842
ATG6_1
Autophagy protein.
    
 0.842
LST8
TOR complex subunit lst8.
     
 0.807
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.