Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DOA4 | HSE1 | A0A1B8GPN4 | A0A1B8GPC9 | Ubiquitin-specific protease doa4; Belongs to the peptidase C19 family. | ESCRT-0 subunit protein hse1. | 0.892 |
DOA4 | RPS27A | A0A1B8GPN4 | A0A2P6FH79 | Ubiquitin-specific protease doa4; Belongs to the peptidase C19 family. | Ribosomal 40S subunit protein S27A. | 0.861 |
DOA4 | RRN7 | A0A1B8GPN4 | A0A2P6FH20 | Ubiquitin-specific protease doa4; Belongs to the peptidase C19 family. | Pol I core factor CF. | 0.841 |
DOA4 | VE01_01175 | A0A1B8GPN4 | A0A1B8GY54 | Ubiquitin-specific protease doa4; Belongs to the peptidase C19 family. | Uncharacterized protein. | 0.405 |
DOA4 | VE01_01246 | A0A1B8GPN4 | A0A1B8GXR7 | Ubiquitin-specific protease doa4; Belongs to the peptidase C19 family. | Ubiquitin-like domain-containing protein. | 0.848 |
DOA4 | VE01_04046 | A0A1B8GPN4 | A0A1B8GQC7 | Ubiquitin-specific protease doa4; Belongs to the peptidase C19 family. | Uncharacterized protein. | 0.815 |
DOA4 | VE01_06547 | A0A1B8GPN4 | A0A1B8GHQ5 | Ubiquitin-specific protease doa4; Belongs to the peptidase C19 family. | BZIP domain-containing protein. | 0.861 |
DOA4 | VE01_07728 | A0A1B8GPN4 | A0A1B8GET7 | Ubiquitin-specific protease doa4; Belongs to the peptidase C19 family. | Ubiquitin-like domain-containing protein. | 0.962 |
DOA4 | VE01_08675 | A0A1B8GPN4 | A0A1B8GCE6 | Ubiquitin-specific protease doa4; Belongs to the peptidase C19 family. | MPN domain-containing protein. | 0.564 |
DOA4 | VPS27 | A0A1B8GPN4 | A0A1B8GVY0 | Ubiquitin-specific protease doa4; Belongs to the peptidase C19 family. | Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. | 0.891 |
HSE1 | DOA4 | A0A1B8GPC9 | A0A1B8GPN4 | ESCRT-0 subunit protein hse1. | Ubiquitin-specific protease doa4; Belongs to the peptidase C19 family. | 0.892 |
HSE1 | RPS27A | A0A1B8GPC9 | A0A2P6FH79 | ESCRT-0 subunit protein hse1. | Ribosomal 40S subunit protein S27A. | 0.848 |
HSE1 | RRN7 | A0A1B8GPC9 | A0A2P6FH20 | ESCRT-0 subunit protein hse1. | Pol I core factor CF. | 0.838 |
HSE1 | VE01_01175 | A0A1B8GPC9 | A0A1B8GY54 | ESCRT-0 subunit protein hse1. | Uncharacterized protein. | 0.910 |
HSE1 | VE01_01246 | A0A1B8GPC9 | A0A1B8GXR7 | ESCRT-0 subunit protein hse1. | Ubiquitin-like domain-containing protein. | 0.838 |
HSE1 | VE01_04046 | A0A1B8GPC9 | A0A1B8GQC7 | ESCRT-0 subunit protein hse1. | Uncharacterized protein. | 0.913 |
HSE1 | VE01_06547 | A0A1B8GPC9 | A0A1B8GHQ5 | ESCRT-0 subunit protein hse1. | BZIP domain-containing protein. | 0.848 |
HSE1 | VE01_07728 | A0A1B8GPC9 | A0A1B8GET7 | ESCRT-0 subunit protein hse1. | Ubiquitin-like domain-containing protein. | 0.877 |
HSE1 | VE01_08675 | A0A1B8GPC9 | A0A1B8GCE6 | ESCRT-0 subunit protein hse1. | MPN domain-containing protein. | 0.901 |
HSE1 | VPS27 | A0A1B8GPC9 | A0A1B8GVY0 | ESCRT-0 subunit protein hse1. | Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. | 0.988 |
page 1 of 5