STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE01_01022Uncharacterized protein. (646 aa)    
Predicted Functional Partners:
VE01_07701
Uncharacterized protein.
   
 0.936
SKN7
Kinase-regulated stress-responsive transcription factor skn7.
    
 0.722
VE01_07474
Uncharacterized protein.
   
 0.714
VE01_07857
Uncharacterized protein.
   
 0.712
VE01_09399
BTB domain-containing protein.
   
 0.691
GDE1
Glycerophosphocholine phosphodiesterase.
    
 0.680
RGA2
Rho-type gtpase-activating protein.
    
 0.671
VE01_01631
ANK_REP_REGION domain-containing protein.
    
 0.653
VE01_03937
ANK_REP_REGION domain-containing protein.
    
  0.635
GPB1
Guanine nucleotide-binding protein subunit beta 1.
   
 0.630
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.