STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE01_01012Zinc_ribbon_16 domain-containing protein. (1030 aa)    
Predicted Functional Partners:
VE01_04498
WD_REPEATS_REGION domain-containing protein.
  
 
 0.998
RTC1
SEA (Seh1-associated) complex subunit.
  
 
 0.998
SEH1
Epoxide hydrolase, soluble (SEH); Belongs to the WD repeat SEC13 family.
    
 0.996
NPR2
Nitrogen permease regulating protein.
    
 0.996
IML1
Vacuolar membrane-associated protein iml1.
   
 0.996
SEC13
GTPase-activating protein S13; Belongs to the WD repeat SEC13 family.
    
 0.996
NPR3
Nitrogen permease regulator 3.
    
 0.987
GTR1
GTP-binding protein gtr1.
    
 0.979
VE01_00716
Uncharacterized protein.
    
 0.976
VE01_05410
Methyltranfer_dom domain-containing protein.
    
 0.928
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.