Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GUT2 | VE01_00795 | A0A1B8GM68 | A0A2P2SVV2 | Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | AAA domain-containing protein. | 0.926 |
PRE3 | RPN1 | A0A1B8GWF2 | A0A1B8GWU1 | Proteasome subunit beta. | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.990 |
PRE3 | RPN2 | A0A1B8GWF2 | A0A1B8GS31 | Proteasome subunit beta. | 26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.991 |
PRE3 | RPN3 | A0A1B8GWF2 | A0A1B8GC00 | Proteasome subunit beta. | 26S proteasome non-ATPase regulatory subunit. | 0.987 |
PRE3 | RPN6 | A0A1B8GWF2 | A0A1B8GH04 | Proteasome subunit beta. | 26S proteasome regulatory subunit rpn6. | 0.994 |
PRE3 | RPN9 | A0A1B8GWF2 | A0A1B8GFX0 | Proteasome subunit beta. | 26S proteasome regulatory subunit. | 0.995 |
PRE3 | UBP6 | A0A1B8GWF2 | A0A1B8GDI6 | Proteasome subunit beta. | Ubiquitin carboxyl-terminal hydrolase. | 0.982 |
PRE3 | VE01_00795 | A0A1B8GWF2 | A0A2P2SVV2 | Proteasome subunit beta. | AAA domain-containing protein. | 0.897 |
PRE3 | VE01_01873 | A0A1B8GWF2 | A0A1B8GW53 | Proteasome subunit beta. | PCI domain-containing protein. | 0.993 |
PRE3 | VE01_10132 | A0A1B8GWF2 | A0A1B8G7T0 | Proteasome subunit beta. | VWFA domain-containing protein. | 0.998 |
RPN1 | PRE3 | A0A1B8GWU1 | A0A1B8GWF2 | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | Proteasome subunit beta. | 0.990 |
RPN1 | RPN2 | A0A1B8GWU1 | A0A1B8GS31 | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.999 |
RPN1 | RPN3 | A0A1B8GWU1 | A0A1B8GC00 | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 26S proteasome non-ATPase regulatory subunit. | 0.999 |
RPN1 | RPN6 | A0A1B8GWU1 | A0A1B8GH04 | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 26S proteasome regulatory subunit rpn6. | 0.999 |
RPN1 | RPN9 | A0A1B8GWU1 | A0A1B8GFX0 | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 26S proteasome regulatory subunit. | 0.999 |
RPN1 | UBP6 | A0A1B8GWU1 | A0A1B8GDI6 | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | Ubiquitin carboxyl-terminal hydrolase. | 0.997 |
RPN1 | VE01_00795 | A0A1B8GWU1 | A0A2P2SVV2 | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | AAA domain-containing protein. | 0.920 |
RPN1 | VE01_01873 | A0A1B8GWU1 | A0A1B8GW53 | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | PCI domain-containing protein. | 0.999 |
RPN1 | VE01_10132 | A0A1B8GWU1 | A0A1B8G7T0 | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | VWFA domain-containing protein. | 0.999 |
RPN2 | PRE3 | A0A1B8GS31 | A0A1B8GWF2 | 26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | Proteasome subunit beta. | 0.991 |
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