STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE01_00966Uncharacterized protein. (97 aa)    
Predicted Functional Partners:
VE01_10092
BHLH domain-containing protein.
    
 0.820
VE01_00992
BHLH domain-containing protein.
   
 
 0.542
VE01_01200
Uncharacterized protein.
   
 
 0.490
VE01_06435
Uncharacterized protein.
   
 0.485
VE01_01791
Homeobox domain-containing protein.
   
 0.485
TIM54
Mitochondrial import inner membrane translocase subunit tim54.
   
 0.485
VE01_01775
HTH araC/xylS-type domain-containing protein.
   
  
 0.478
VE01_03819
Alginate_lyase domain-containing protein.
   
 
 0.477
VE01_01540
Uncharacterized protein.
    
 
 0.450
VE01_06338
HMG box domain-containing protein.
   
 0.447
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.