STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE01_00014DUF1992 domain-containing protein. (527 aa)    
Predicted Functional Partners:
GDE1
Glycerophosphocholine phosphodiesterase.
    
 0.823
VE01_06008
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.800
VE01_05752
Uncharacterized protein.
    
  0.800
PHO81
Phosphate system positive regulatory protein pho81.
    
 0.549
UTP20
U3 snoRNP protein.
   
  0.534
NOP58
Nucleolar protein 58.
    
  0.533
UTP5
Small subunit (SSU) processome component.
    
  0.520
VE01_09060
CBF domain-containing protein.
    
  0.514
EMG1
18S rRNA pseudouridine methyltransferase.
    
  0.514
SOF1
rRNA-processing protein sof1.
    
  0.514
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.