STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE01_00303C3H1-type domain-containing protein. (327 aa)    
Predicted Functional Partners:
SDS23
Adenyl nucleotide binding.
   
 0.873
SNF4
AMP-activated serine/threonine-protein kinase regulatory subunit.
   
 0.873
VE01_01900
Rho-GAP domain-containing protein.
   
 0.873
VE01_08336
Uncharacterized protein.
   
 0.857
GSY1
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
  0.751
VE01_05874
Protein kinase domain-containing protein.
    
 0.742
VE01_06765
GLYCOSYL_HYDROL_F45 domain-containing protein.
    
 0.742
VE01_05693
Uncharacterized protein.
    
 0.742
VE01_05322
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.742
VE01_04070
Protein kinase domain-containing protein.
    
 0.742
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.