Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HAT2 | VE01_00204 | A0A1B8GL03 | A0A2P2SXV8 | Histone acetyltransferase type B subunit 2. | Uncharacterized protein. | 0.552 |
MUS81 | POL3 | A0A1B8GKR8 | A0A1B8GSJ6 | Crossover junction endonuclease mus81. | DNA polymerase. | 0.774 |
MUS81 | VE01_00204 | A0A1B8GKR8 | A0A2P2SXV8 | Crossover junction endonuclease mus81. | Uncharacterized protein. | 0.629 |
MUS81 | VE01_10568 | A0A1B8GKR8 | A0A1B8G6K4 | Crossover junction endonuclease mus81. | ERCC4 domain-containing protein. | 0.966 |
POL3 | MUS81 | A0A1B8GSJ6 | A0A1B8GKR8 | DNA polymerase. | Crossover junction endonuclease mus81. | 0.774 |
POL3 | VE01_00204 | A0A1B8GSJ6 | A0A2P2SXV8 | DNA polymerase. | Uncharacterized protein. | 0.615 |
POL3 | VE01_01631 | A0A1B8GSJ6 | A0A1B8GWL2 | DNA polymerase. | ANK_REP_REGION domain-containing protein. | 0.496 |
POL3 | VE01_03197 | A0A1B8GSJ6 | A0A1B8GR43 | DNA polymerase. | Uncharacterized protein. | 0.999 |
POL3 | VE01_10568 | A0A1B8GSJ6 | A0A1B8G6K4 | DNA polymerase. | ERCC4 domain-containing protein. | 0.683 |
SMD2 | SME1 | A0A1B8GWC8 | A0A1B8GQ38 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
SMD2 | SMG1 | A0A1B8GWC8 | A0A1B8GAE3 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein G. | 0.999 |
SMD2 | VE01_00204 | A0A1B8GWC8 | A0A2P2SXV8 | Small nuclear ribonucleoprotein Sm D2. | Uncharacterized protein. | 0.583 |
SMD2 | VE01_06993 | A0A1B8GWC8 | A0A1B8GEC0 | Small nuclear ribonucleoprotein Sm D2. | Uncharacterized protein. | 0.978 |
SME1 | SMD2 | A0A1B8GQ38 | A0A1B8GWC8 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
SME1 | SMG1 | A0A1B8GQ38 | A0A1B8GAE3 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Small nuclear ribonucleoprotein G. | 0.999 |
SME1 | VE01_00204 | A0A1B8GQ38 | A0A2P2SXV8 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Uncharacterized protein. | 0.589 |
SME1 | VE01_06993 | A0A1B8GQ38 | A0A1B8GEC0 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Uncharacterized protein. | 0.975 |
SMG1 | SMD2 | A0A1B8GAE3 | A0A1B8GWC8 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
SMG1 | SME1 | A0A1B8GAE3 | A0A1B8GQ38 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
SMG1 | VE01_00204 | A0A1B8GAE3 | A0A2P2SXV8 | Small nuclear ribonucleoprotein G. | Uncharacterized protein. | 0.573 |
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