Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PNA2_0098 | PNA2_0099 | PNA2_0098 | PNA2_0099 | Alpha-glucan phosphorylase. | Hypothetical protein. | 0.803 |
PNA2_0098 | PNA2_0100 | PNA2_0098 | PNA2_0100 | Alpha-glucan phosphorylase. | Hypothetical protein. | 0.786 |
PNA2_0098 | mtaD | PNA2_0098 | PNA2_0101 | Alpha-glucan phosphorylase. | N-ethylammeline chlorohydrolase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family. | 0.786 |
PNA2_0098 | pyrD | PNA2_0098 | PNA2_0102 | Alpha-glucan phosphorylase. | Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate. | 0.589 |
PNA2_0099 | PNA2_0098 | PNA2_0099 | PNA2_0098 | Hypothetical protein. | Alpha-glucan phosphorylase. | 0.803 |
PNA2_0099 | PNA2_0100 | PNA2_0099 | PNA2_0100 | Hypothetical protein. | Hypothetical protein. | 0.787 |
PNA2_0099 | PNA2_0103 | PNA2_0099 | PNA2_0103 | Hypothetical protein. | ADP forming acetyl coenzyme A synthetase. | 0.402 |
PNA2_0099 | kptA | PNA2_0099 | PNA2_0695 | Hypothetical protein. | RNA 2'-phosphotransferase-like protein; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.450 |
PNA2_0099 | mtaD | PNA2_0099 | PNA2_0101 | Hypothetical protein. | N-ethylammeline chlorohydrolase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family. | 0.808 |
PNA2_0099 | pyrD | PNA2_0099 | PNA2_0102 | Hypothetical protein. | Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate. | 0.563 |
PNA2_0099 | smc | PNA2_0099 | PNA2_0399 | Hypothetical protein. | Chromosome segregation protein smc1; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.563 |
PNA2_0100 | PNA2_0098 | PNA2_0100 | PNA2_0098 | Hypothetical protein. | Alpha-glucan phosphorylase. | 0.786 |
PNA2_0100 | PNA2_0099 | PNA2_0100 | PNA2_0099 | Hypothetical protein. | Hypothetical protein. | 0.787 |
PNA2_0100 | mtaD | PNA2_0100 | PNA2_0101 | Hypothetical protein. | N-ethylammeline chlorohydrolase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family. | 0.803 |
PNA2_0100 | pyrD | PNA2_0100 | PNA2_0102 | Hypothetical protein. | Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate. | 0.560 |
PNA2_0103 | PNA2_0099 | PNA2_0103 | PNA2_0099 | ADP forming acetyl coenzyme A synthetase. | Hypothetical protein. | 0.402 |
PNA2_0103 | pyrD | PNA2_0103 | PNA2_0102 | ADP forming acetyl coenzyme A synthetase. | Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate. | 0.546 |
kptA | PNA2_0099 | PNA2_0695 | PNA2_0099 | RNA 2'-phosphotransferase-like protein; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | Hypothetical protein. | 0.450 |
mtaD | PNA2_0098 | PNA2_0101 | PNA2_0098 | N-ethylammeline chlorohydrolase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family. | Alpha-glucan phosphorylase. | 0.786 |
mtaD | PNA2_0099 | PNA2_0101 | PNA2_0099 | N-ethylammeline chlorohydrolase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family. | Hypothetical protein. | 0.808 |
page 1 of 2