Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PNA2_0621 | PNA2_0711 | PNA2_0621 | PNA2_0711 | Fructose 1,6-bisphosphate aldolase class 1 (fba). | L-fuculose phosphate aldolase. | 0.927 |
PNA2_0621 | fbp | PNA2_0621 | PNA2_1387 | Fructose 1,6-bisphosphate aldolase class 1 (fba). | Hypothetical protein; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P). | 0.955 |
PNA2_0621 | tpiA | PNA2_0621 | PNA2_0471 | Fructose 1,6-bisphosphate aldolase class 1 (fba). | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.964 |
PNA2_0708 | PNA2_0709 | PNA2_0708 | PNA2_0709 | Hypothetical protein. | Hypothetical protein. | 0.808 |
PNA2_0708 | PNA2_0710 | PNA2_0708 | PNA2_0710 | Hypothetical protein. | Hypothetical protein. | 0.669 |
PNA2_0708 | PNA2_0711 | PNA2_0708 | PNA2_0711 | Hypothetical protein. | L-fuculose phosphate aldolase. | 0.669 |
PNA2_0709 | PNA2_0708 | PNA2_0709 | PNA2_0708 | Hypothetical protein. | Hypothetical protein. | 0.808 |
PNA2_0709 | PNA2_0710 | PNA2_0709 | PNA2_0710 | Hypothetical protein. | Hypothetical protein. | 0.669 |
PNA2_0709 | PNA2_0711 | PNA2_0709 | PNA2_0711 | Hypothetical protein. | L-fuculose phosphate aldolase. | 0.669 |
PNA2_0710 | PNA2_0708 | PNA2_0710 | PNA2_0708 | Hypothetical protein. | Hypothetical protein. | 0.669 |
PNA2_0710 | PNA2_0709 | PNA2_0710 | PNA2_0709 | Hypothetical protein. | Hypothetical protein. | 0.669 |
PNA2_0710 | PNA2_0711 | PNA2_0710 | PNA2_0711 | Hypothetical protein. | L-fuculose phosphate aldolase. | 0.808 |
PNA2_0711 | PNA2_0621 | PNA2_0711 | PNA2_0621 | L-fuculose phosphate aldolase. | Fructose 1,6-bisphosphate aldolase class 1 (fba). | 0.927 |
PNA2_0711 | PNA2_0708 | PNA2_0711 | PNA2_0708 | L-fuculose phosphate aldolase. | Hypothetical protein. | 0.669 |
PNA2_0711 | PNA2_0709 | PNA2_0711 | PNA2_0709 | L-fuculose phosphate aldolase. | Hypothetical protein. | 0.669 |
PNA2_0711 | PNA2_0710 | PNA2_0711 | PNA2_0710 | L-fuculose phosphate aldolase. | Hypothetical protein. | 0.808 |
PNA2_0711 | PNA2_0868 | PNA2_0711 | PNA2_0868 | L-fuculose phosphate aldolase. | D-arabino 3-hexulose 6-phosphate formaldehyde lyase. | 0.819 |
PNA2_0711 | PNA2_1353 | PNA2_0711 | PNA2_1353 | L-fuculose phosphate aldolase. | Translation initiation factor IF-2B subunit beta; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the EIF-2B alpha/beta/delta subunits family. MtnA subfamily. | 0.745 |
PNA2_0711 | fbp | PNA2_0711 | PNA2_1387 | L-fuculose phosphate aldolase. | Hypothetical protein; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P). | 0.900 |
PNA2_0711 | glyA | PNA2_0711 | PNA2_0242 | L-fuculose phosphate aldolase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.690 |
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