Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
PNA2_1008 | PNA2_1009 | Hypothetical protein. | Hypothetical protein. | 0.808 |
PNA2_1008 | PNA2_1010 | Hypothetical protein. | Hypothetical protein. | 0.639 |
PNA2_1008 | PNA2_1011 | Hypothetical protein. | Hypothetical protein. | 0.658 |
PNA2_1008 | PNA2_1012 | Hypothetical protein. | Methanol dehydrogenase regulator. | 0.586 |
PNA2_1008 | PNA2_1013 | Hypothetical protein. | Hypothetical protein. | 0.642 |
PNA2_1008 | PNA2_1014 | Hypothetical protein. | Hypothetical protein. | 0.642 |
PNA2_1008 | PNA2_1015 | Hypothetical protein. | Hypothetical protein. | 0.625 |
PNA2_1008 | PNA2_1016 | Hypothetical protein. | Glycosyl transferase. | 0.435 |
PNA2_1008 | PNA2_1017 | Hypothetical protein. | Hypothetical protein. | 0.425 |
PNA2_1008 | PNA2_1018 | Hypothetical protein. | UDP-N-acetyl-D-mannosamine 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.425 |
PNA2_1009 | PNA2_1008 | Hypothetical protein. | Hypothetical protein. | 0.808 |
PNA2_1009 | PNA2_1010 | Hypothetical protein. | Hypothetical protein. | 0.625 |
PNA2_1009 | PNA2_1011 | Hypothetical protein. | Hypothetical protein. | 0.637 |
PNA2_1009 | PNA2_1012 | Hypothetical protein. | Methanol dehydrogenase regulator. | 0.584 |
PNA2_1009 | PNA2_1013 | Hypothetical protein. | Hypothetical protein. | 0.587 |
PNA2_1009 | PNA2_1014 | Hypothetical protein. | Hypothetical protein. | 0.587 |
PNA2_1009 | PNA2_1015 | Hypothetical protein. | Hypothetical protein. | 0.585 |
PNA2_1009 | PNA2_1016 | Hypothetical protein. | Glycosyl transferase. | 0.453 |
PNA2_1009 | PNA2_1017 | Hypothetical protein. | Hypothetical protein. | 0.428 |
PNA2_1009 | PNA2_1018 | Hypothetical protein. | UDP-N-acetyl-D-mannosamine 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.425 |
page 1 of 6