STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001418085_00815Unannotated protein. (135 aa)    
Predicted Functional Partners:
GCA_001418085_02214
Unannotated protein.
  
     0.763
GCA_001418085_00179
Unannotated protein.
  
     0.729
GCA_001418085_03052
Unannotated protein.
  
     0.719
GCA_001418085_01603
Unannotated protein.
  
     0.701
GCA_001418085_03079
Unannotated protein.
  
     0.679
GCA_001418085_01059
Unannotated protein.
  
     0.673
GCA_001418085_02882
Unannotated protein.
  
     0.672
GCA_001418085_00814
Unannotated protein.
       0.640
GCA_001418085_01647
Unannotated protein.
  
     0.631
GCA_001418085_00936
Unannotated protein.
  
     0.609
Your Current Organism:
Lacinutrix algicola
NCBI taxonomy Id: 342954
Other names: JCM 13825, KCCM 42313, L. algicola, Lacinutrix algicola Nedashkovskaya et al. 2008, Lacinutrix sp. AKS293, strain AKS293
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.