STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001418085_00993Unannotated protein. (739 aa)    
Predicted Functional Partners:
GCA_001418085_01199
Unannotated protein.
    
 
 0.981
GCA_001418085_01108
Unannotated protein.
   
   0.977
GCA_001418085_01193
Unannotated protein.
    
   0.977
GCA_001418085_01196
Unannotated protein.
    
   0.977
GCA_001418085_01197
Unannotated protein.
    
 
 0.977
GCA_001418085_01203
Unannotated protein.
   
   0.977
GCA_001418085_01200
Unannotated protein.
  
 
   0.956
GCA_001418085_01189
Unannotated protein.
  
 
   0.955
GCA_001418085_01184
Unannotated protein.
    
  0.947
GCA_001418085_01206
Unannotated protein.
    
  0.947
Your Current Organism:
Lacinutrix algicola
NCBI taxonomy Id: 342954
Other names: JCM 13825, KCCM 42313, L. algicola, Lacinutrix algicola Nedashkovskaya et al. 2008, Lacinutrix sp. AKS293, strain AKS293
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.