STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001418085_01829Unannotated protein. (301 aa)    
Predicted Functional Partners:
GCA_001418085_01828
Unannotated protein.
 
     0.917
GCA_001418085_00070
Unannotated protein.
  
     0.757
GCA_001418085_01032
Unannotated protein.
  
     0.733
GCA_001418085_01250
Unannotated protein.
  
     0.733
GCA_001418085_01285
Unannotated protein.
  
 0.719
GCA_001418085_01830
Unannotated protein.
 
     0.714
GCA_001418085_03370
Unannotated protein.
  
     0.695
GCA_001418085_03010
Unannotated protein.
  
     0.681
GCA_001418085_03033
Unannotated protein.
  
     0.666
GCA_001418085_00399
Unannotated protein.
  
     0.657
Your Current Organism:
Lacinutrix algicola
NCBI taxonomy Id: 342954
Other names: JCM 13825, KCCM 42313, L. algicola, Lacinutrix algicola Nedashkovskaya et al. 2008, Lacinutrix sp. AKS293, strain AKS293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.