STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001418085_02712Unannotated protein. (241 aa)    
Predicted Functional Partners:
GCA_001418085_02510
Unannotated protein.
  
 0.958
GCA_001418085_02508
Unannotated protein.
  
 
 0.895
GCA_001418085_02265
Unannotated protein.
  
 0.820
GCA_001418085_02713
Unannotated protein.
       0.773
GCA_001418085_01384
Unannotated protein.
    
  0.762
GCA_001418085_02714
Unannotated protein.
       0.633
GCA_001418085_02715
Unannotated protein.
       0.618
GCA_001418085_02048
Unannotated protein.
    
  0.549
GCA_001418085_02410
Unannotated protein.
    
  0.549
GCA_001418085_00104
Unannotated protein.
    
  0.531
Your Current Organism:
Lacinutrix algicola
NCBI taxonomy Id: 342954
Other names: JCM 13825, KCCM 42313, L. algicola, Lacinutrix algicola Nedashkovskaya et al. 2008, Lacinutrix sp. AKS293, strain AKS293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.