STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001418015_00489Unannotated protein. (284 aa)    
Predicted Functional Partners:
GCA_001418015_00224
Unannotated protein.
  
 
 0.925
GCA_001418015_00225
Unannotated protein.
  
 
 0.898
GCA_001418015_03446
Unannotated protein.
     
 0.836
GCA_001418015_01929
Unannotated protein.
    
  0.801
GCA_001418015_03052
Unannotated protein.
     
 0.779
GCA_001418015_02519
Unannotated protein.
   
 
  0.709
GCA_001418015_00434
Unannotated protein.
  
 
 0.706
GCA_001418015_00226
Unannotated protein.
  
 
 0.666
GCA_001418015_01298
Unannotated protein.
  
    0.650
GCA_001418015_01791
Unannotated protein.
     
 0.647
Your Current Organism:
Lacinutrix mariniflava
NCBI taxonomy Id: 342955
Other names: JCM 13824, KCCM 42306, L. mariniflava, Lacinutrix mariniflava Nedashkovskaya et al. 2008, Lacinutrix sp. AKS432, strain AKS432
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.