STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001418015_01479Unannotated protein. (485 aa)    
Predicted Functional Partners:
GCA_001418015_02834
Unannotated protein.
  
 
 
 0.955
GCA_001418015_02833
Unannotated protein.
    
 
 0.941
GCA_001418015_01220
Unannotated protein.
 
 
 0.938
GCA_001418015_01016
Unannotated protein.
   
 
 0.864
GCA_001418015_02611
Unannotated protein.
 
  
 0.841
GCA_001418015_01111
Unannotated protein.
 
  
 0.838
GCA_001418015_00817
Unannotated protein.
 
  
 0.831
GCA_001418015_01480
Unannotated protein.
       0.773
GCA_001418015_02360
Unannotated protein.
 
  
 0.728
GCA_001418015_03376
Unannotated protein.
  
 
 0.719
Your Current Organism:
Lacinutrix mariniflava
NCBI taxonomy Id: 342955
Other names: JCM 13824, KCCM 42306, L. mariniflava, Lacinutrix mariniflava Nedashkovskaya et al. 2008, Lacinutrix sp. AKS432, strain AKS432
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.