STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001418015_02287Unannotated protein. (302 aa)    
Predicted Functional Partners:
GCA_001418015_02286
Unannotated protein.
       0.782
GCA_001418015_02289
Unannotated protein.
       0.676
GCA_001418015_02288
Unannotated protein.
       0.668
GCA_001418015_02285
Unannotated protein.
       0.641
GCA_001418015_02291
Unannotated protein.
 
     0.634
GCA_001418015_02294
Unannotated protein.
 
     0.564
GCA_001418015_02290
Unannotated protein.
 
     0.526
GCA_001418015_02284
Unannotated protein.
 
     0.475
Your Current Organism:
Lacinutrix mariniflava
NCBI taxonomy Id: 342955
Other names: JCM 13824, KCCM 42306, L. mariniflava, Lacinutrix mariniflava Nedashkovskaya et al. 2008, Lacinutrix sp. AKS432, strain AKS432
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.