STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU30813.1Hypothetical protein. (143 aa)    
Predicted Functional Partners:
SFU30774.1
Mor transcription activator family protein.
       0.773
SFU30796.1
Hypothetical protein.
       0.773
SFU30831.1
Hypothetical protein.
       0.773
SFU30850.1
Protein of unknown function.
       0.773
SFU30868.1
Hypothetical protein.
       0.773
SFU30885.1
Hypothetical protein.
       0.773
SFU30902.1
Protein of unknown function.
       0.773
SFU30920.1
Hypothetical protein.
       0.773
SFU30941.1
Hypothetical protein.
       0.689
SFU30954.1
Hypothetical protein.
       0.689
Your Current Organism:
Acidovorax caeni
NCBI taxonomy Id: 343013
Other names: A. caeni, Acidovorax caeni Heylen et al. 2008, Acidovorax sp. R-24607, Acidovorax sp. R-24608, Acidovorax sp. R-24613, Acidovorax sp. R-24614, DSM 19327, LMG 24103, LMG:24103, strain R-24608
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.