STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU49078.1Hypothetical protein. (418 aa)    
Predicted Functional Partners:
SFU49064.1
Flagellar hook-associated protein 3 FlgL.
 
     0.868
SFU49047.1
Flagellar hook-associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family.
 
     0.844
SFU49033.1
Flagellar protein FlgJ.
 
     0.801
SFU70181.1
Hypothetical protein.
  
     0.728
flgI
Flagellar P-ring protein precursor FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.704
SFU90927.1
Hypothetical protein.
  
     0.697
SFU79143.1
Flagellar biosynthesis protein FlhF.
 
     0.680
SFU93220.1
Flagellar assembly protein FliH.
  
     0.660
SFU77879.1
HD-like signal output (HDOD) domain, no enzymatic activity.
  
     0.648
SFU79178.1
Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
     0.614
Your Current Organism:
Acidovorax caeni
NCBI taxonomy Id: 343013
Other names: A. caeni, Acidovorax caeni Heylen et al. 2008, Acidovorax sp. R-24607, Acidovorax sp. R-24608, Acidovorax sp. R-24613, Acidovorax sp. R-24614, DSM 19327, LMG 24103, LMG:24103, strain R-24608
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