STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU78880.1HD domain-containing protein. (419 aa)    
Predicted Functional Partners:
SFU78610.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
  0.801
SFU79673.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.754
SFU58558.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.747
SFU52752.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
  0.719
SFU59113.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
  0.713
SFU79873.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
  
 0.685
SFU59835.1
HD domain-containing protein.
  
     0.673
SFU88145.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
  
 0.645
SFU84627.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
  0.615
SFU57379.1
Hemerythrin.
 
  0.614
Your Current Organism:
Acidovorax caeni
NCBI taxonomy Id: 343013
Other names: A. caeni, Acidovorax caeni Heylen et al. 2008, Acidovorax sp. R-24607, Acidovorax sp. R-24608, Acidovorax sp. R-24613, Acidovorax sp. R-24614, DSM 19327, LMG 24103, LMG:24103, strain R-24608
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.