STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU81229.1Predicted ferric reductase. (444 aa)    
Predicted Functional Partners:
SFU61730.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
   
    0.696
SFU88951.1
Salicylate hydroxylase.
   
    0.696
SFU44684.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
   
    0.653
SFU98596.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
   
    0.653
SFU74407.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family /amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
   
    0.523
SFU87171.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family /amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
   
    0.523
SFU98602.1
Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
   
    0.523
SFU81244.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.413
SFU81259.1
Uncharacterized membrane protein.
 
     0.401
Your Current Organism:
Acidovorax caeni
NCBI taxonomy Id: 343013
Other names: A. caeni, Acidovorax caeni Heylen et al. 2008, Acidovorax sp. R-24607, Acidovorax sp. R-24608, Acidovorax sp. R-24613, Acidovorax sp. R-24614, DSM 19327, LMG 24103, LMG:24103, strain R-24608
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