Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SG0432 | SG1947 | SG0432 | SG1947 | Thiamine ABC transporter permease component. | Conserved hypothetical protein; Belongs to the UPF0325 family. | 0.511 |
SG0432 | thiB | SG0432 | SG0433 | Thiamine ABC transporter permease component. | Thiamine ABC transporter periplasmic component. | 0.988 |
SG0432 | thiQ | SG0432 | SG0431 | Thiamine ABC transporter permease component. | Thiamine ABC transporter ATP-binding component; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.990 |
SG1947 | SG0432 | SG1947 | SG0432 | Conserved hypothetical protein; Belongs to the UPF0325 family. | Thiamine ABC transporter permease component. | 0.511 |
SG1947 | thiB | SG1947 | SG0433 | Conserved hypothetical protein; Belongs to the UPF0325 family. | Thiamine ABC transporter periplasmic component. | 0.552 |
thiB | SG0432 | SG0433 | SG0432 | Thiamine ABC transporter periplasmic component. | Thiamine ABC transporter permease component. | 0.988 |
thiB | SG1947 | SG0433 | SG1947 | Thiamine ABC transporter periplasmic component. | Conserved hypothetical protein; Belongs to the UPF0325 family. | 0.552 |
thiB | thiQ | SG0433 | SG0431 | Thiamine ABC transporter periplasmic component. | Thiamine ABC transporter ATP-binding component; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.957 |
thiQ | SG0432 | SG0431 | SG0432 | Thiamine ABC transporter ATP-binding component; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | Thiamine ABC transporter permease component. | 0.990 |
thiQ | thiB | SG0431 | SG0433 | Thiamine ABC transporter ATP-binding component; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | Thiamine ABC transporter periplasmic component. | 0.957 |