STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SG0616Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (231 aa)    
Predicted Functional Partners:
SG1986
Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.732
SG2124
Putative lysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.689
oxyR_4
Hydrogen peroxide-inducible regulon activator; Belongs to the LysR transcriptional regulatory family.
  
    0.681
SG1956
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.506
oxyR_5
lysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.506
gltR
lysR-family transcriptional regulatory protein.
  
    0.418
cysB
Cysteine regulon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.417
Your Current Organism:
Sodalis glossinidius
NCBI taxonomy Id: 343509
Other names: S. glossinidius str. 'morsitans', Sodalis glossinidius str. 'morsitans'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.