STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hinPhage DNA-invertase. (196 aa)    
Predicted Functional Partners:
SG1008
Putative phage replication protein.
   
    0.846
SG1204
Putative phage tail protein.
   
    0.845
SG1563
Putative phage capsid scaffolding protein.
   
    0.845
SG0244
Putative phage capsid portal protein.
   
    0.835
SG1203
Putative phage tail protein.
   
    0.829
SG1567
Putative phage tail protein.
   
    0.811
SG1207
Hypothetical phage protein.
   
    0.804
SG1200
Putative phage tail protein.
   
    0.797
SG1860
Putative phage tail protein.
   
    0.797
SG0754
Hypothetical protein.
   
    0.526
Your Current Organism:
Sodalis glossinidius
NCBI taxonomy Id: 343509
Other names: S. glossinidius str. 'morsitans', Sodalis glossinidius str. 'morsitans'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.