STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SG2190Hypothetical phage protein. (245 aa)    
Predicted Functional Partners:
SG1090
Putative phage tail assembly protein.
 
  
 0.899
SG1642
Putative phage tail assembly protein.
 
  
 0.899
SG1964
Conserved hypothetical protein.
  
    0.597
SG0148
Conserved hypothetical protein.
  
     0.587
SG2189
Phage lysozyme lysis protein.
  
     0.561
SG0188
Putative exported protein.
  
     0.529
SG0729
Hypothetical phage protein.
  
    0.476
SG0740
Conserved hypothetical protein.
  
     0.472
SG0095
Hypothetical phage protein.
  
     0.468
SG1146
Hypothetical phage protein.
  
     0.468
Your Current Organism:
Sodalis glossinidius
NCBI taxonomy Id: 343509
Other names: S. glossinidius str. 'morsitans', Sodalis glossinidius str. 'morsitans'
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.