STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGI89_01180Unannotated protein. (294 aa)    
Predicted Functional Partners:
cdsA
Unannotated protein; Belongs to the CDS family.
    
 0.914
EGI89_01185
Unannotated protein.
       0.782
mpl
Unannotated protein.
       0.776
GCA_000805695_00613
Unannotated protein.
  
 
 
 0.720
EGI89_12725
Unannotated protein.
  
     0.687
GCA_000805695_01432
Unannotated protein.
  
     0.630
EGI89_10380
Unannotated protein.
  
     0.613
GCA_000805695_01434
Unannotated protein.
  
     0.599
EGI89_03730
Unannotated protein.
 
   
 0.586
GCA_000805695_03385
Unannotated protein.
  
 
 
 0.573
Your Current Organism:
Empedobacter falsenii
NCBI taxonomy Id: 343874
Other names: CCUG 51536, CIP 108861, E. falsenii, Empedobacter falsenii (Kampfer et al. 2006) Zhang et al. 2014, Wautersiella falsenii, Wautersiella falsenii (Kampfer et al. 2006) emend. Zhang et al. 2014, strain NF 993
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.