STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
echA8_2Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. (261 aa)    
Predicted Functional Partners:
paaA
Unannotated protein.
 
 
 0.998
EGI89_11385
Unannotated protein.
 
 
 0.998
paaC
Unannotated protein.
 
 
 0.998
PaaJ
Unannotated protein.
 
 
 0.998
paaH
Unannotated protein.
 0.998
boxD
Unannotated protein.
 
 0.996
hmp_2
Unannotated protein.
  
 
 0.991
pcaF_2
Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.972
hmp_1
Unannotated protein.
  
 
 0.972
fadB2
Unannotated protein.
 0.965
Your Current Organism:
Empedobacter falsenii
NCBI taxonomy Id: 343874
Other names: CCUG 51536, CIP 108861, E. falsenii, Empedobacter falsenii (Kampfer et al. 2006) Zhang et al. 2014, Wautersiella falsenii, Wautersiella falsenii (Kampfer et al. 2006) emend. Zhang et al. 2014, strain NF 993
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.