STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000805695_01262Unannotated protein. (288 aa)    
Predicted Functional Partners:
GCA_000805695_02211
Unannotated protein.
 
     0.756
GCA_000805695_00079
Unannotated protein.
  
     0.753
GCA_000805695_01546
Unannotated protein.
  
     0.752
GCA_000805695_02212
Unannotated protein.
 
     0.751
GCA_000805695_02457
Unannotated protein.
  
     0.749
GCA_000805695_01545
Unannotated protein.
  
     0.727
GCA_000805695_00080
Unannotated protein.
  
     0.726
GCA_000805695_00001
Unannotated protein.
  
     0.675
GCA_000805695_00078
Unannotated protein.
  
     0.648
GCA_000805695_00230
Unannotated protein.
  
     0.646
Your Current Organism:
Empedobacter falsenii
NCBI taxonomy Id: 343874
Other names: CCUG 51536, CIP 108861, E. falsenii, Empedobacter falsenii (Kampfer et al. 2006) Zhang et al. 2014, Wautersiella falsenii, Wautersiella falsenii (Kampfer et al. 2006) emend. Zhang et al. 2014, strain NF 993
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.