STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000805695_01384Unannotated protein. (262 aa)    
Predicted Functional Partners:
GCA_000805695_01383
Unannotated protein.
 
    0.835
GCA_000805695_01385
Unannotated protein.
  
    0.804
GCA_000805695_01381
Unannotated protein.
  
    0.795
GCA_000805695_01382
Unannotated protein.
  
    0.795
GCA_000805695_01387
Unannotated protein.
  
    0.795
GCA_000805695_01386
Unannotated protein.
       0.777
GCA_000805695_01380
Unannotated protein.
       0.776
GCA_000805695_01388
Unannotated protein.
       0.773
hyaD_3
Unannotated protein.
    0.599
tagE
Unannotated protein.
    0.548
Your Current Organism:
Empedobacter falsenii
NCBI taxonomy Id: 343874
Other names: CCUG 51536, CIP 108861, E. falsenii, Empedobacter falsenii (Kampfer et al. 2006) Zhang et al. 2014, Wautersiella falsenii, Wautersiella falsenii (Kampfer et al. 2006) emend. Zhang et al. 2014, strain NF 993
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.