STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iaaAUnannotated protein. (339 aa)    
Predicted Functional Partners:
aspA
Unannotated protein.
    
 0.956
asnA
Unannotated protein.
     
  0.936
aspC
Unannotated protein.
    
  0.927
EGI89_09715
Unannotated protein.
    
  0.927
GCA_000805695_00033
Unannotated protein.
  
  
 
0.923
ansA
Unannotated protein.
     
 0.908
purA
Unannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.903
argG
Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
  0.900
nadB
Unannotated protein; Catalyzes the oxidation of L-aspartate to iminoaspartate.
     
  0.900
lysC
Unannotated protein; Belongs to the aspartokinase family.
     
  0.800
Your Current Organism:
Empedobacter falsenii
NCBI taxonomy Id: 343874
Other names: CCUG 51536, CIP 108861, E. falsenii, Empedobacter falsenii (Kampfer et al. 2006) Zhang et al. 2014, Wautersiella falsenii, Wautersiella falsenii (Kampfer et al. 2006) emend. Zhang et al. 2014, strain NF 993
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.