STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000805695_02035Unannotated protein. (441 aa)    
Predicted Functional Partners:
yhjE
Unannotated protein.
 
     0.799
GCA_000805695_03007
Unannotated protein.
  
     0.581
GCA_000805695_01071
Unannotated protein.
  
     0.550
GCA_000805695_01900
Unannotated protein.
  
     0.540
GCA_000805695_03396
Unannotated protein.
  
     0.539
EGI89_00185
Unannotated protein.
  
     0.536
EGI89_00055
Unannotated protein.
  
     0.532
GCA_000805695_01857
Unannotated protein.
  
     0.528
GCA_000805695_00100
Unannotated protein.
  
     0.468
GCA_000805695_02241
Unannotated protein.
  
     0.457
Your Current Organism:
Empedobacter falsenii
NCBI taxonomy Id: 343874
Other names: CCUG 51536, CIP 108861, E. falsenii, Empedobacter falsenii (Kampfer et al. 2006) Zhang et al. 2014, Wautersiella falsenii, Wautersiella falsenii (Kampfer et al. 2006) emend. Zhang et al. 2014, strain NF 993
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.