STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PorVUnannotated protein. (401 aa)    
Predicted Functional Partners:
SprA
Unannotated protein.
  
 
 0.996
PorU
Unannotated protein.
 
   
 0.945
GldJ
Unannotated protein.
 
     0.881
GCA_000805695_01322
Unannotated protein.
  
   
 0.817
GCA_000805695_01857
Unannotated protein.
  
   
 0.785
GCA_000805695_00496
Unannotated protein.
  
   
 0.781
GCA_000805695_00619
Unannotated protein.
  
    0.777
srrA_2
Unannotated protein.
  
   
 0.774
GCA_000805695_03116
Unannotated protein.
 
 
 0.774
EGI89_05075
Unannotated protein.
  
     0.773
Your Current Organism:
Empedobacter falsenii
NCBI taxonomy Id: 343874
Other names: CCUG 51536, CIP 108861, E. falsenii, Empedobacter falsenii (Kampfer et al. 2006) Zhang et al. 2014, Wautersiella falsenii, Wautersiella falsenii (Kampfer et al. 2006) emend. Zhang et al. 2014, strain NF 993
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.