STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ramA_1Unannotated protein. (260 aa)    
Predicted Functional Partners:
aspC
Unannotated protein.
 
 0.942
EGI89_09715
Unannotated protein.
 
 
 0.932
gdhA
Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.930
nadB
Unannotated protein; Catalyzes the oxidation of L-aspartate to iminoaspartate.
    
 0.925
mqo
Unannotated protein.
  
  
  0.824
pckA
Unannotated protein; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
    
 0.807
sucA
Unannotated protein.
     
  0.806
gltA2
Unannotated protein; Belongs to the citrate synthase family.
   
 
  0.802
icd
Unannotated protein; Belongs to the monomeric-type IDH family.
    
  0.800
bcrC
Unannotated protein.
       0.777
Your Current Organism:
Empedobacter falsenii
NCBI taxonomy Id: 343874
Other names: CCUG 51536, CIP 108861, E. falsenii, Empedobacter falsenii (Kampfer et al. 2006) Zhang et al. 2014, Wautersiella falsenii, Wautersiella falsenii (Kampfer et al. 2006) emend. Zhang et al. 2014, strain NF 993
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.