STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000805695_02537Unannotated protein. (532 aa)    
Predicted Functional Partners:
GCA_000805695_02536
Unannotated protein.
     0.942
parB
Unannotated protein; Belongs to the ParB family.
  
 
 0.777
GCA_000805695_01557
Unannotated protein.
  
 
 0.690
GCA_000805695_03464
Unannotated protein.
     0.649
GCA_000805695_00753
Unannotated protein.
  
 
 
 0.580
rnhB
Unannotated protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.527
GCA_000805695_02538
Unannotated protein.
       0.526
GCA_000805695_02443
Unannotated protein.
  
 
 
 0.516
GCA_000805695_00230
Unannotated protein.
  
 
 
 0.495
GCA_000805695_00075
Unannotated protein.
  
 
   0.473
Your Current Organism:
Empedobacter falsenii
NCBI taxonomy Id: 343874
Other names: CCUG 51536, CIP 108861, E. falsenii, Empedobacter falsenii (Kampfer et al. 2006) Zhang et al. 2014, Wautersiella falsenii, Wautersiella falsenii (Kampfer et al. 2006) emend. Zhang et al. 2014, strain NF 993
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.