STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000805695_03324Unannotated protein. (933 aa)    
Predicted Functional Partners:
GCA_000805695_03325
Unannotated protein.
 
     0.935
GCA_000805695_03323
Unannotated protein.
 
     0.852
xynC
Unannotated protein; Belongs to the glycosyl hydrolase 30 family.
 
     0.742
GCA_000805695_03326
Unannotated protein; Belongs to the glycosyl hydrolase 30 family.
 
     0.670
GCA_000805695_00389
Unannotated protein.
  
    0.650
GCA_000805695_02268
Unannotated protein.
  
 0.625
GCA_000805695_03401
Unannotated protein.
  
 0.625
GCA_000805695_01306
Unannotated protein.
 
   
 0.489
GCA_000805695_03274
Unannotated protein.
  
     0.488
glgB
Unannotated protein; Belongs to the glycosyl hydrolase 13 family.
  
     0.487
Your Current Organism:
Empedobacter falsenii
NCBI taxonomy Id: 343874
Other names: CCUG 51536, CIP 108861, E. falsenii, Empedobacter falsenii (Kampfer et al. 2006) Zhang et al. 2014, Wautersiella falsenii, Wautersiella falsenii (Kampfer et al. 2006) emend. Zhang et al. 2014, strain NF 993
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.