STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrh4ATP-dependent RNA helicase mrh4, mitochondrial; ATP-binding RNA helicase involved in mitochondrial RNA metabolism. Required for maintenance of mitochondrial DNA (By similarity); Belongs to the DEAD box helicase family. MRH4 subfamily. (632 aa)    
Predicted Functional Partners:
ACLA_068260
mRNA splicing factor (Prp1/Zer1), putative.
    
 0.743
ACLA_096940
mRNA-nucleus export ATPase (Elf1), putative.
  
 
 0.704
ACLA_057320
U5 snRNP component (116 kDa), putative.
   
 0.703
ACLA_007260
Elongation factor.
  
 
 0.678
ACLA_089160
Cell division control protein (Cdc5), putative.
    
 0.657
ACLA_086510
RNase3 domain protein.
    
 0.646
ACLA_013560
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.635
ACLA_031110
ATP synthase subunit gamma.
   
 
 0.634
ACLA_015620
U6 small nuclear ribonucleoprotein (Lsm3), putative.
    
 0.617
dhh1
ATP-dependent RNA helicase dhh1; ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping. Is involved in G1/S DNA-damage checkpoint recovery, probably through the regulation of the translational status of a subset of mRNAs. May also have a role in translation and mRNA nuclear export (By similarity); Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily.
  
0.607
Your Current Organism:
Aspergillus clavatus
NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.