STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL57923.1COG3267 Type II secretory pathway, component ExeA (predicted ATPase). (647 aa)    
Predicted Functional Partners:
EDL58831.1
Hypothetical protein; COG1639 Predicted signal transduction protein.
  
     0.504
EDL57922.1
COG1652 Uncharacterized protein containing LysM domain.
   
   0.461
PppA_1
Probable type 4 prepilin-like proteins leader peptide processing enzyme; COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases.
 
    0.458
EDL61626.1
GGDEF domain-like protein; COG1639 Predicted signal transduction protein.
  
     0.458
EDL57924.1
Hypothetical protein.
       0.453
CheX
Hypothetical protein; COG1406 Predicted inhibitor of MCP methylation, homolog of CheC.
  
     0.413
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.