STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZraR_4Acetoacetate metabolism regulatory protein atoC; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (465 aa)    
Predicted Functional Partners:
LuxQ_3
Probable sensor/response regulator hybrid; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.829
RpfC_1
Probable sensor/response regulator hybrid; COG2202 FOG: PAS/PAC domain.
  
 
 0.829
FlgE
COG1749 Flagellar hook protein FlgE.
  
  
 0.789
LuxQ_2
Probable sensor/response regulator hybrid; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.787
RpoN
COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog.
 
   
 0.780
FixL_2
Sensor protein fixL; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
 
 
 0.679
KinA
Probable two-component sensor histidine kinase FixL; COG0642 Signal transduction histidine kinase.
 
 
   0.539
EDL60708.1
Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain.
 
 
 0.502
EDL58994.1
Sensory box histidine kinase/response regulator; COG2203 FOG: GAF domain.
 
 
 0.489
EDL56089.1
Hypothetical protein.
       0.473
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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