Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CslB | EDL61247.1 | PM8797T_25226 | PM8797T_03429 | Poly(beta-D-mannuronate) lyase; COG3420 Nitrous oxidase accessory protein. | Possible pectin degradation protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. | 0.428 |
| EDL56483.1 | EDL61247.1 | PM8797T_19390 | PM8797T_03429 | Hypothetical protein; COG1802 Transcriptional regulators. | Possible pectin degradation protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. | 0.510 |
| EDL61247.1 | CslB | PM8797T_03429 | PM8797T_25226 | Possible pectin degradation protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. | Poly(beta-D-mannuronate) lyase; COG3420 Nitrous oxidase accessory protein. | 0.428 |
| EDL61247.1 | EDL56483.1 | PM8797T_03429 | PM8797T_19390 | Possible pectin degradation protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. | Hypothetical protein; COG1802 Transcriptional regulators. | 0.510 |
| EDL61247.1 | LutR_2 | PM8797T_03429 | PM8797T_16013 | Possible pectin degradation protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. | Transcriptional regulator, GntR family protein; COG2186 Transcriptional regulators. | 0.429 |
| EDL61247.1 | LutR_3 | PM8797T_03429 | PM8797T_22918 | Possible pectin degradation protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. | Transcriptional regulator (GntR family) protein; COG2186 Transcriptional regulators. | 0.479 |
| EDL61247.1 | LutR_4 | PM8797T_03429 | PM8797T_20928 | Possible pectin degradation protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. | COG2186 Transcriptional regulators. | 0.519 |
| EDL61247.1 | PaiB | PM8797T_03429 | PM8797T_03434 | Possible pectin degradation protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. | Transcriptional repressor of sporulation and degradative enzyme production; COG2808 Transcriptional regulator. | 0.513 |
| LutR_2 | EDL61247.1 | PM8797T_16013 | PM8797T_03429 | Transcriptional regulator, GntR family protein; COG2186 Transcriptional regulators. | Possible pectin degradation protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. | 0.429 |
| LutR_3 | EDL61247.1 | PM8797T_22918 | PM8797T_03429 | Transcriptional regulator (GntR family) protein; COG2186 Transcriptional regulators. | Possible pectin degradation protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. | 0.479 |
| LutR_4 | EDL61247.1 | PM8797T_20928 | PM8797T_03429 | COG2186 Transcriptional regulators. | Possible pectin degradation protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. | 0.519 |
| PaiB | EDL61247.1 | PM8797T_03434 | PM8797T_03429 | Transcriptional repressor of sporulation and degradative enzyme production; COG2808 Transcriptional regulator. | Possible pectin degradation protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. | 0.513 |